Hostname: page-component-8448b6f56d-cfpbc Total loading time: 0 Render date: 2024-04-23T09:26:55.264Z Has data issue: false hasContentIssue false

Prevalence of human astrovirus serotype 4: capsid protein sequence and comparison with other strains

Published online by Cambridge University Press:  15 May 2009

M. M. Willcocks
Affiliation:
School of Biological Sciences, University of Surrey, Guildford GU2 5XH, UK
J. B. Kurtz
Affiliation:
Virology Laboratory, John Radcliffe Hospital, Headington, Oxford OX3 9DU
T. W. Lee
Affiliation:
Virology Laboratory, John Radcliffe Hospital, Headington, Oxford OX3 9DU
M. J. Carter*
Affiliation:
School of Biological Sciences, University of Surrey, Guildford GU2 5XH, UK
*
* Author for correspondence.
Rights & Permissions [Opens in a new window]

Summary

Core share and HTML view are not available for this content. However, as you have access to this content, a full PDF is available via the ‘Save PDF’ action button.

Astrovirus serotype 4 has increased in relative prevalence in the Oxford, UK area in 1993. The structural gene of human astrovirus serotype 4 has been sequenced and the results indicate that this protein differs substantially from serotypes 1 and 2. In particular, conservation at the C terminus is greatly reduced. However, amino acid substitutions in this region show a strong conservation in character suggesting that structural or functional constraints operate in this region.

Type
Research Article
Copyright
Copyright © Cambridge University Press 1995

References

REFERENCES

1.Madeley, CR, Cosgrove, BP. Viruses in infantile gastroenteritis. Lancet 1975; ii: 124.CrossRefGoogle ScholarPubMed
2.Madeley, CR, Cosgrove, BP. 28 nm particles in faeces in infantile gastroenteritis. Lancet 1975; ii: 451–2.CrossRefGoogle ScholarPubMed
3.Willcocks, MM, Carter, MJ, Madeley, CR. Astroviruses. Rev Med Virol 1992; 2: 97106.CrossRefGoogle Scholar
4.Madeley, CR, Cosgrove, BP, Bell, EJ, Fallon, RJ. Stool viruses in babies in Glasgow. 1. Hospital admissions with diarrhoea. J Hyg 1977; 78: 261–73.CrossRefGoogle Scholar
5.Oshiro, LS, Haley, CE, Roberts, RR et al. , A 27 nanometre virus isolated during an outbreak of acute infectious nonbacterial gastroenteritis in a convalescent hospital: a possible new serotype. J Infect Dis 1981; 143: 791–5.CrossRefGoogle Scholar
6.Willcocks, MM, Carter, MJ, Silcock, JG, Madeley, CR. A dot-blot hybridization procedure for the detection of astrovirus in stool samples. Epidemiol Infect 1991; 107: 405–10.CrossRefGoogle ScholarPubMed
7.Silcock, JG, Willcocks, MM, Codd, A, Carter, MJ, Record, CO. Virus involvement in community acquired diarrhoea examined by stool dot-blot hybridization and electron microscopy. Europ J Gastroent Hepatol 1993; 5: 601–6.CrossRefGoogle Scholar
8.Oliver, AR, Phillips, AD. An electron microscopical investigation of faecal small round viruses. J Med Virol 1988; 24: 211–18.CrossRefGoogle ScholarPubMed
9.Herrmann, JE, Taylor, DN, Echeverria, P, Blacklow, NR. Astroviruses as a cause of gastroenteritis in children. N Eng J Med 1991; 324: 1757–60.CrossRefGoogle ScholarPubMed
10.Kurtz, JB, Lee, TW. Astroviruses: human and animal. In: Bock, G, Whelan, J, eds. Novel diarrhoea viruses. CIBA Foundation Symposium 128. Chichester: John Wiley and Sons, 1987:92107.Google Scholar
11.Lee, TW, Kurtz, JB. Prevalence of human astrovirus serotypes in the Oxford region 1976–1992, with evidence for two new serotypes. Epidemiol Infect 1994; 112: 187–93.CrossRefGoogle Scholar
12.Oishi, I, Yamazaki, K, Kimoto, T et al. , A large outbreak of acute gastroenteritis associated with astrovirus among students and teachers in Osaka, Japan. J Infect Dis 1994; 170: 439–43.CrossRefGoogle ScholarPubMed
13.Myint, S, Manley, R, Cubitt, WD. Viruses in bathing waters. Lancet 1994; 343: 1640–1.CrossRefGoogle ScholarPubMed
14.Lee, TW, Kurtz, JB. Human astrovirus serotypes. J Hyg 1982; 89: 539–40.CrossRefGoogle ScholarPubMed
15.Kurtz, JB, Lee, TW. Human astrovirus serotypes. Lancet 1984; ii: 1405.CrossRefGoogle ScholarPubMed
16.Lee, TW, Kurtz, JB. Serial propagation of astrovirus in tissue culture with the aid of trypsin. J Gen Virol 1981; 57: 421–4.CrossRefGoogle ScholarPubMed
17.Willcocks, MM, Carter, MJ, Laidler, FR, Madeley, CR. Growth and characterization of human faecal astrovirus in a continuous cell line. Arch Virol 1990; 113: 7382.CrossRefGoogle Scholar
18.Willcocks, MM.Carter, MJ. The 3′ terminal sequence of a human astrovirus. Arch Virol 1992; 124: 279–89.CrossRefGoogle ScholarPubMed
19.Willcocks, MM, Carter, MJ. Identification and sequence determination of the capsid protein gene of human astrovirus serotype 1. FEMS Micro Lett 1993; 114: 18.CrossRefGoogle ScholarPubMed
20.Brow, MAD. Sequencing with Taq DNA polymerase. In: Innis, MA, Gelfand, DH, Sninsky, JJ, White, TJ, eds. PCR protocols. A guide to methods and applications. San Diego: Academic Press, 1990: 189–96.Google Scholar
21.Willcocks, MM, Madeley, CR, Brown, TDK, Carter, MJ. The complete sequence of a human astrovirus. J Gen Virol 1994; 75: 1785–8.CrossRefGoogle ScholarPubMed
22.Jiang, B, Monroe, SS, Koonin, EV, Stine, SE, Glass, RI. RNA sequence of astrovirus: distinctive genomic organization and a putative retrovirus-like ribosomal frame-shifting signal that directs the viral replicase synthesis. Proc Natl Acad Sci USA 1993; 90: 10539–43.CrossRefGoogle Scholar
23.Monroe, SS, Jiang, B, Stine, SE, Koopmans, M, Glass, RI. Subgenomic RNA sequence of human astrovirus supports classification of Astroviridae as a new family of RNA viruses. J Virol 1993; 6: 3611–14.CrossRefGoogle Scholar
24.Monroe, SS, Stine, SE, Gorelkin, L, Herrman, JE, Blacklow, NR, Glass, RI. Temporal synthesis of proteins and RNAs during human astrovirus infection of cultured cells. J Virol 1991; 65: 641–48.CrossRefGoogle ScholarPubMed
25.Kurtz, JB. Astroviruses. In: Farthing, MJG, ed. Viruses and the gut. Proceedings of the ninth BSG, Smith Kline and French International Workshop, 1989: 84–7.Google Scholar
26.Sanchez-Fauquier, A, Carrascosa, AL, Carrascosa, JL et al. , Characterisation of a human astrovirus serotype 2 structural protein (VP26) that contains an epitope involved in virus neutralization. Virology 1994; 201: 312–20.CrossRefGoogle ScholarPubMed
27.Lewis, TL, Greenberg, HB, Herrmann, JE, Smith, LS, Matsui, SM. Analysis of astrovirus serotype 1 RNA, identification of the viral RNA-dependent RNA polymerase motif, and expression of a viral structural protein. J Virol 1994; 68: 7793.CrossRefGoogle ScholarPubMed